aind_behavior_curriculum.curriculum.Curriculum¶
- class aind_behavior_curriculum.curriculum.Curriculum(*, pkg_location: str = <factory>, name: str = 'Please subclass, rename, and define a StageGraph with your own Stage objs Ex: StageGraph[Union[StageA, StageB, Graduated]]', version: ~typing.Annotated[str, _PydanticGeneralMetadata(pattern='^(0|[1-9]\\d*)\\.(0|[1-9]\\d*)\\.(0|[1-9]\\d*)(?:-((?:0|[1-9]\\d*|\\d*[a-zA-Z-][0-9a-zA-Z-]*)(?:\\.(?:0|[1-9]\\d*|\\d*[a-zA-Z-][0-9a-zA-Z-]*))*))?(?:\\+([0-9a-zA-Z-]+(?:\\.[0-9a-zA-Z-]+)*))?$')] = '0.0.0', graph: ~aind_behavior_curriculum.curriculum.StageGraph = StageGraph(nodes={}, graph={}))[source]¶
Bases:
AindBehaviorModelCurriculum manages a StageGraph instance with a read/write API. To use, subclass this and add subclass metrics.
- __init__(**data: Any) None[source]¶
Create a new model by parsing and validating input data from keyword arguments.
Raises [ValidationError][pydantic_core.ValidationError] if the input data cannot be validated to form a valid model.
self is explicitly positional-only to allow self as a field name.
Methods
__init__(**data)Create a new model by parsing and validating input data from keyword arguments.
add_stage(stage)Adds a floating stage to the Curriculum adjacency graph.
add_stage_transition(start_stage, ...)Add stage transition between two stages: Stage_A -> Stage_B.
construct([_fields_set])copy(*[, include, exclude, update, deep])Returns a copy of the model.
Location of the python package that instantiated the Curriculum.
dict(*[, include, exclude, by_alias, ...])from_orm(obj)json(*[, include, exclude, by_alias, ...])model_construct([_fields_set])Creates a new instance of the Model class with validated data.
model_copy(*[, update, deep])Usage docs: https://docs.pydantic.dev/2.10/concepts/serialization/#model_copy
model_dump(*[, mode, include, exclude, ...])Usage docs: https://docs.pydantic.dev/2.10/concepts/serialization/#modelmodel_dump
model_dump_json(*[, indent, include, ...])Usage docs: https://docs.pydantic.dev/2.10/concepts/serialization/#modelmodel_dump_json
model_json_schema([by_alias, ref_template, ...])Generates a JSON schema for a model class.
model_parametrized_name(params)Compute the class name for parametrizations of generic classes.
model_post_init(_BaseModel__context)Override this method to perform additional initialization after __init__ and model_construct.
model_rebuild(*[, force, raise_errors, ...])Try to rebuild the pydantic-core schema for the model.
model_validate(obj, *[, strict, ...])Validate a pydantic model instance.
model_validate_json(json_data, *[, strict, ...])Usage docs: https://docs.pydantic.dev/2.10/concepts/json/#json-parsing
model_validate_strings(obj, *[, strict, context])Validate the given object with string data against the Pydantic model.
parse_file(path, *[, content_type, ...])parse_obj(obj)parse_raw(b, *[, content_type, encoding, ...])remove_stage(stage)Removes stage and all associated incoming/outgoing transition rules from the curriculum graph.
remove_stage_transition(start_stage, ...[, ...])Removes transition with options to remove start/end stages associated with the transition.
schema([by_alias, ref_template])schema_json(*[, by_alias, ref_template])see_stage_transitions(stage)See transitions of stage in curriculum graph.
See stages of curriculum graph.
set_stage_transition_priority(stage, ...)Change the order of stage transitions listed under a stage.
Create a Discriminated Union type for the known tasks.
update_forward_refs(**localns)validate(value)Validate curriculum for export/serialization.
Attributes
model_computed_fieldsConfiguration for the model, should be a dictionary conforming to [ConfigDict][pydantic.config.ConfigDict].
Get extra fields set during validation.
model_fieldsReturns the set of fields that have been explicitly set on this model instance.
pkg_locationnameversiongraph- add_stage_transition(start_stage: Stage, dest_stage: Stage, rule: StageTransition) None[source]¶
Add stage transition between two stages: Stage_A -> Stage_B.
- If Stage_A has been added to stage before, this method starts a transition
from the existing Stage_A.
- If Stage_B has been added to stage before, this method creates a transition
into the existing Stage_B.
NOTE: The order in which this method is called sets the order of transition priority.
- copy(*, include: AbstractSetIntStr | MappingIntStrAny | None = None, exclude: AbstractSetIntStr | MappingIntStrAny | None = None, update: Dict[str, Any] | None = None, deep: bool = False) Self[source]¶
Returns a copy of the model.
- !!! warning “Deprecated”
This method is now deprecated; use model_copy instead.
If you need include or exclude, use:
`python {test="skip" lint="skip"} data = self.model_dump(include=include, exclude=exclude, round_trip=True) data = {**data, **(update or {})} copied = self.model_validate(data) `- Parameters:
include – Optional set or mapping specifying which fields to include in the copied model.
exclude – Optional set or mapping specifying which fields to exclude in the copied model.
update – Optional dictionary of field-value pairs to override field values in the copied model.
deep – If True, the values of fields that are Pydantic models will be deep-copied.
- Returns:
A copy of the model with included, excluded and updated fields as specified.
- classmethod default_pkg_location_factory() str[source]¶
Location of the python package that instantiated the Curriculum.
- model_config: ClassVar[ConfigDict] = {'extra': 'forbid', 'str_strip_whitespace': True, 'strict': True, 'validate_assignment': True, 'validate_default': True}[source]¶
Configuration for the model, should be a dictionary conforming to [ConfigDict][pydantic.config.ConfigDict].
- classmethod model_construct(_fields_set: set[str] | None = None, **values: Any) Self[source]¶
Creates a new instance of the Model class with validated data.
Creates a new model setting __dict__ and __pydantic_fields_set__ from trusted or pre-validated data. Default values are respected, but no other validation is performed.
- !!! note
model_construct() generally respects the model_config.extra setting on the provided model. That is, if model_config.extra == ‘allow’, then all extra passed values are added to the model instance’s __dict__ and __pydantic_extra__ fields. If model_config.extra == ‘ignore’ (the default), then all extra passed values are ignored. Because no validation is performed with a call to model_construct(), having model_config.extra == ‘forbid’ does not result in an error if extra values are passed, but they will be ignored.
- Parameters:
_fields_set – A set of field names that were originally explicitly set during instantiation. If provided, this is directly used for the [model_fields_set][pydantic.BaseModel.model_fields_set] attribute. Otherwise, the field names from the values argument will be used.
values – Trusted or pre-validated data dictionary.
- Returns:
A new instance of the Model class with validated data.
- model_copy(*, update: Mapping[str, Any] | None = None, deep: bool = False) Self[source]¶
Usage docs: https://docs.pydantic.dev/2.10/concepts/serialization/#model_copy
Returns a copy of the model.
- Parameters:
update – Values to change/add in the new model. Note: the data is not validated before creating the new model. You should trust this data.
deep – Set to True to make a deep copy of the model.
- Returns:
New model instance.
- model_dump(*, mode: Literal['json', 'python'] | str = 'python', include: Set[int] | Set[str] | Mapping[int, Set[int] | Set[str] | Mapping[int, IncEx | bool] | Mapping[str, IncEx | bool] | bool] | Mapping[str, Set[int] | Set[str] | Mapping[int, IncEx | bool] | Mapping[str, IncEx | bool] | bool] | None = None, exclude: Set[int] | Set[str] | Mapping[int, Set[int] | Set[str] | Mapping[int, IncEx | bool] | Mapping[str, IncEx | bool] | bool] | Mapping[str, Set[int] | Set[str] | Mapping[int, IncEx | bool] | Mapping[str, IncEx | bool] | bool] | None = None, context: Any | None = None, by_alias: bool = False, exclude_unset: bool = False, exclude_defaults: bool = False, exclude_none: bool = False, round_trip: bool = False, warnings: bool | Literal['none', 'warn', 'error'] = True, serialize_as_any: bool = False) dict[str, Any][source]¶
Usage docs: https://docs.pydantic.dev/2.10/concepts/serialization/#modelmodel_dump
Generate a dictionary representation of the model, optionally specifying which fields to include or exclude.
- Parameters:
mode – The mode in which to_python should run. If mode is ‘json’, the output will only contain JSON serializable types. If mode is ‘python’, the output may contain non-JSON-serializable Python objects.
include – A set of fields to include in the output.
exclude – A set of fields to exclude from the output.
context – Additional context to pass to the serializer.
by_alias – Whether to use the field’s alias in the dictionary key if defined.
exclude_unset – Whether to exclude fields that have not been explicitly set.
exclude_defaults – Whether to exclude fields that are set to their default value.
exclude_none – Whether to exclude fields that have a value of None.
round_trip – If True, dumped values should be valid as input for non-idempotent types such as Json[T].
warnings – How to handle serialization errors. False/”none” ignores them, True/”warn” logs errors, “error” raises a [PydanticSerializationError][pydantic_core.PydanticSerializationError].
serialize_as_any – Whether to serialize fields with duck-typing serialization behavior.
- Returns:
A dictionary representation of the model.
- model_dump_json(*, indent: int | None = None, include: Set[int] | Set[str] | Mapping[int, Set[int] | Set[str] | Mapping[int, IncEx | bool] | Mapping[str, IncEx | bool] | bool] | Mapping[str, Set[int] | Set[str] | Mapping[int, IncEx | bool] | Mapping[str, IncEx | bool] | bool] | None = None, exclude: Set[int] | Set[str] | Mapping[int, Set[int] | Set[str] | Mapping[int, IncEx | bool] | Mapping[str, IncEx | bool] | bool] | Mapping[str, Set[int] | Set[str] | Mapping[int, IncEx | bool] | Mapping[str, IncEx | bool] | bool] | None = None, context: Any | None = None, by_alias: bool = False, exclude_unset: bool = False, exclude_defaults: bool = False, exclude_none: bool = False, round_trip: bool = False, warnings: bool | Literal['none', 'warn', 'error'] = True, serialize_as_any: bool = False) str[source]¶
Usage docs: https://docs.pydantic.dev/2.10/concepts/serialization/#modelmodel_dump_json
Generates a JSON representation of the model using Pydantic’s to_json method.
- Parameters:
indent – Indentation to use in the JSON output. If None is passed, the output will be compact.
include – Field(s) to include in the JSON output.
exclude – Field(s) to exclude from the JSON output.
context – Additional context to pass to the serializer.
by_alias – Whether to serialize using field aliases.
exclude_unset – Whether to exclude fields that have not been explicitly set.
exclude_defaults – Whether to exclude fields that are set to their default value.
exclude_none – Whether to exclude fields that have a value of None.
round_trip – If True, dumped values should be valid as input for non-idempotent types such as Json[T].
warnings – How to handle serialization errors. False/”none” ignores them, True/”warn” logs errors, “error” raises a [PydanticSerializationError][pydantic_core.PydanticSerializationError].
serialize_as_any – Whether to serialize fields with duck-typing serialization behavior.
- Returns:
A JSON string representation of the model.
- property model_extra: dict[str, Any] | None[source]¶
Get extra fields set during validation.
- Returns:
A dictionary of extra fields, or None if config.extra is not set to “allow”.
- property model_fields_set: set[str][source]¶
Returns the set of fields that have been explicitly set on this model instance.
- Returns:
- A set of strings representing the fields that have been set,
i.e. that were not filled from defaults.
- classmethod model_json_schema(by_alias: bool = True, ref_template: str = '#/$defs/{model}', schema_generator: type[~pydantic.json_schema.GenerateJsonSchema] = <class 'pydantic.json_schema.GenerateJsonSchema'>, mode: ~typing.Literal['validation', 'serialization'] = 'validation') dict[str, Any][source]¶
Generates a JSON schema for a model class.
- Parameters:
by_alias – Whether to use attribute aliases or not.
ref_template – The reference template.
schema_generator – To override the logic used to generate the JSON schema, as a subclass of GenerateJsonSchema with your desired modifications
mode – The mode in which to generate the schema.
- Returns:
The JSON schema for the given model class.
- classmethod model_parametrized_name(params: tuple[type[Any], ...]) str[source]¶
Compute the class name for parametrizations of generic classes.
This method can be overridden to achieve a custom naming scheme for generic BaseModels.
- Parameters:
params – Tuple of types of the class. Given a generic class Model with 2 type variables and a concrete model Model[str, int], the value (str, int) would be passed to params.
- Returns:
String representing the new class where params are passed to cls as type variables.
- Raises:
TypeError – Raised when trying to generate concrete names for non-generic models.
- model_post_init(_BaseModel__context: Any) None[source]¶
Override this method to perform additional initialization after __init__ and model_construct. This is useful if you want to do some validation that requires the entire model to be initialized.
- classmethod model_rebuild(*, force: bool = False, raise_errors: bool = True, _parent_namespace_depth: int = 2, _types_namespace: MappingNamespace | None = None) bool | None[source]¶
Try to rebuild the pydantic-core schema for the model.
This may be necessary when one of the annotations is a ForwardRef which could not be resolved during the initial attempt to build the schema, and automatic rebuilding fails.
- Parameters:
force – Whether to force the rebuilding of the model schema, defaults to False.
raise_errors – Whether to raise errors, defaults to True.
_parent_namespace_depth – The depth level of the parent namespace, defaults to 2.
_types_namespace – The types namespace, defaults to None.
- Returns:
Returns None if the schema is already “complete” and rebuilding was not required. If rebuilding _was_ required, returns True if rebuilding was successful, otherwise False.
- classmethod model_validate(obj: Any, *, strict: bool | None = None, from_attributes: bool | None = None, context: Any | None = None) Self[source]¶
Validate a pydantic model instance.
- Parameters:
obj – The object to validate.
strict – Whether to enforce types strictly.
from_attributes – Whether to extract data from object attributes.
context – Additional context to pass to the validator.
- Raises:
ValidationError – If the object could not be validated.
- Returns:
The validated model instance.
- classmethod model_validate_json(json_data: str | bytes | bytearray, *, strict: bool | None = None, context: Any | None = None) Self[source]¶
Usage docs: https://docs.pydantic.dev/2.10/concepts/json/#json-parsing
Validate the given JSON data against the Pydantic model.
- Parameters:
json_data – The JSON data to validate.
strict – Whether to enforce types strictly.
context – Extra variables to pass to the validator.
- Returns:
The validated Pydantic model.
- Raises:
ValidationError – If json_data is not a JSON string or the object could not be validated.
- classmethod model_validate_strings(obj: Any, *, strict: bool | None = None, context: Any | None = None) Self[source]¶
Validate the given object with string data against the Pydantic model.
- Parameters:
obj – The object containing string data to validate.
strict – Whether to enforce types strictly.
context – Extra variables to pass to the validator.
- Returns:
The validated Pydantic model.
- remove_stage(stage: Stage) None[source]¶
Removes stage and all associated incoming/outgoing transition rules from the curriculum graph. NOTE: Removed nodes and transitions have the side effect of changing transition priority.
- remove_stage_transition(start_stage: Stage, dest_stage: Stage, rule: StageTransition, remove_start_stage: bool = False, remove_dest_stage: bool = False) None[source]¶
Removes transition with options to remove start/end stages associated with the transition. NOTE: Removed nodes and transitions has the side effect of changing transition priority.
- see_stage_transitions(stage: Stage) List[Tuple[StageTransition, Stage]][source]¶
See transitions of stage in curriculum graph.
- set_stage_transition_priority(stage: Stage, stage_transitions: List[Tuple[StageTransition, Stage]]) None[source]¶
Change the order of stage transitions listed under a stage. To use, call see_stage_transitions() and order the transitions in the desired priority from left -> right.